AT4G36120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF869) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 41895 Blast hits to 24172 proteins in 1641 species: Archae - 536; Bacteria - 4817; Metazoa - 21606; Fungi - 3730; Plants - 2607; Viruses - 113; Other Eukaryotes - 8486 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17093213..17096573 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 111887.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.31 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||
| Length | 996 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGRGWPWKR KSSDKATTEK PVVGIESTPV CSLSYLASLE NQEKCKNTNY VQITMDSYTH MSRMEDQVKL FEVQVKDLKE KLTLAHSEIN TKESLILQHA 101: KVAEEAVSGW EKADAETLAL KRQLESVTLL KLTAEDRASH LDDALKECTR QIRIVKEESD KKLQDVILAK TSQWDKIKAE LEGKIDELSE GLHRAASDNA 201: ALTRSLQERS EMIVRISEER SKAEADVEKL KTNLQLAEKE ISYLKYDLHV ASKEVEIRNE EKNMSLKSAD IANKQHLEGV KKIAKLEAEC HRLRGLLRKK 301: LPGPAAMAQM KLEVEGLGHE FTDPRAQRNM SQNHNAHIAK AEISTDHKLE ECKRENVYLT RRTLEMEEEI QTLKEHLSAR NNELQVSRNV CAKTLGKLKI 401: LEGQMHMFNN DKNAPKSNSR NLSESLSSGH DHHYPPSVTS VSEDGFDEEG SSSECGPATS LDSHKVRKVS VNGSSKPRSS SRLELMDDFL EIEKLVGSDP 501: DGANSASKSS NSVCSRRSVE KQSSSKSSEP DEDTTTLDQL LMVLRSRINR IFESQEGISI DKIVEAARFS IQEMQGSSTK RMSSHLFEVT DETLEKHVDI 601: QNSEKEQKNT KQQDLEAAVA NIHHFIKSTT KEATQLQDMN GNGQLRESLE DFSSSVSKYP TGESSLSDVM LELSRISVLA SNLNNGALTL KPHSKEIPVT 701: ESNDKVTLLF EESDSNPLGD TFAKTDHCVD NLINGDDSSC KSLLKEVEQL KLEKENIAVE LSRCLQNLES TKAWLEEKEQ LISKLKSQLT SSEDLQSLAE 801: TQLKCVTESY KSLDLHAKEL EAKVKSLEEE TKRLEMAFTT EKHGHEETLA KCRDLQEKMQ RNETCENCSS SKLQPNQEKD IVSATEKLAA CQETIHLLSQ 901: QLQSLQPQSN HILKSRSPEK KFQQHKASEV TPNSALDDLP HVHIIQPSRS VKHTVNPTVH AIMKSSSVSS SSKEDNEKHT RGLGRFFSSK SKNSAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)