AT4G36030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.789 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : armadillo repeat only 3 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
armadillo repeat only 3 (ARO3); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 616 Blast hits to 538 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 129; Plants - 303; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17045084..17047096 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73070.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.14 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||
| Length | 670 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGDLAKQILS RPIQLADQVV KAGDEATINK QECADIKSKT EKLAALLRQA ARASSDLYER PTRRILDDTE NVLEKALTMV QRCRDDGYIM RLFNIIPAAA 101: FRKMISQLEN SVGDVSWLLR VSTPAGNDDD EGFGYLGLPP IAANEPILCL IWEQIAVLMT GSPEDKSDAA ASLASLARDN DRYVKLIVEE GGVNPLLKLV 201: KEGKIDGQEN AARTIGLLGR DPESVEHMIQ LGVCSVLSSI LKEGSMKVQA VVAWAVSELV SGNHAKCQEL FAQNNVIRLL VSHLAFETVQ EHSKYAVVAG 301: RATSMHHAVV MASKISSSKE NLPALNEEED DDNHIGVSSP MTNQMHSIVA TTMAMKAVGS GSKSNLSSRF VTGDDDKPPE KIPEKSYSMS SQIKAYGSIA 401: HQSRNASVTR GRELEDPVTK TYMKAMAARA LWKLAVGNSS ICRVITESRA LLCFAVLLDK GDEETKYNTA MAIMEITAVA EENADLRRSA FRRTSPACKA 501: VVDQLFRIVE NADAGSDLLI PCVRSIGNLA RTFKSAETHM IVPLVKLLDD GEPDLAAEVA IALAKFATED NFLGKEHSRT IIEAGGSKLL VQLAYFGENG 601: AQIPAMVLLS YVAMNVPDSE QLAKDEVLTV LEWSSKQANV LEDEDMEALL YEAKSRLELY QSRGSRGFHL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)