AT4G35450.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ankyrin repeat-containing protein 2 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85180 Blast hits to 28957 proteins in 1321 species: Archae - 144; Bacteria - 6924; Metazoa - 44765; Fungi - 6138; Plants - 3756; Viruses - 866; Other Eukaryotes - 22587 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16840072..16841759 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33076.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.15 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||
| Length | 304 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPGLNFNAFD FSNMASILND PSIREMAEQI AKDPAFNQLA EQLQRSIPNA GQEGGFPNFD PQQYVNTMQQ VMHNPEFKTM AEKLGTALVQ DPQMSPFLDA 101: FSNPETAEHF TERMARMKED PELKPILDEI DAGGPSAMMK YWNDPEVLKK LGEAMGMPVA GLPDQTVSAE PEVAEEGEEE ESIVHQTASL GDVEGLKAAL 201: ASGGNKDEED SEGRTALHFA CGYGELKCAQ VLIDAGASVN AVDKNKNTPL HYAAGYGRKE CVSLLLENGA AVTLQNLDEK TPIDVAKLNS QLEVVKLLEK 301: DAFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)