AT4G35070.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SBP (S-ribonuclease binding protein) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: S-ribonuclease binding protein 1 (TAIR:AT1G45976.1); Has 698 Blast hits to 689 proteins in 99 species: Archae - 0; Bacteria - 9; Metazoa - 204; Fungi - 4; Plants - 376; Viruses - 12; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16694576..16695387 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24145.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.23 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||||||||||||||
| Length | 210 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALSESHHQQ QQSPSQSFLA AQMEKQKQEI DQFIKIQNER LRYVLQEQRK REMEMILRKM ESKALLLMSQ KEEEMSKALN KNMELEDLLR KMEMENQTWQ 101: RMARENEAIV QTLNTTLEQV RERAATCYDA GEAEVEDEGS FCGGEGDGNS LPAKKMKMSS CCCNCGSNGV TRVLFLPCRH LCCCMDCEEG LLLCPICNTP 201: KKSRIEALIF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)