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AT4G34310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 734 Blast hits to 732 proteins in 187 species: Archae - 0; Bacteria - 114; Metazoa - 156; Fungi - 386; Plants - 44; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YIPCeggNOG:KOG2029EMBL:CP002687EnsemblPlants:AT4G34310
EnsemblPlants:AT4G34310.1entrez:829581ExpressionAtlas:F4JKN4Gene3D:3.40.50.1820
GeneID:829581GO:GO:0005622GO:GO:0006505GO:GO:0006886
GO:GO:0016788Gramene:AT4G34310.1hmmpanther:PTHR22731InParanoid:F4JKN4
InterPro:IPR016024InterPro:IPR029058iPTMnet:F4JKN4KEGG:ath:AT4G34310
ncoils:CoilOMA:EQGGMHFPaxDb:F4JKN4Pfam:PF07819
PRIDE:F4JKN4ProteinModelPortal:F4JKN4Proteomes:UP000006548RefSeq:NP_195157.2
STRING:3702.AT4G34310.1SUPFAM:SSF48371SUPFAM:SSF53474TAIR:AT4G34310
UniGene:At.31513UniProt:F4JKN4
Coordinates (TAIR10) chr4:+:16414113..16419542
Molecular Weight (calculated) 133461.00 Da
IEP (calculated) 8.11
GRAVY (calculated) -0.21
Length 1228 amino acids
Sequence (TAIR10)
(BLAST)
0001: MIRLRFNILR SSHRRLFHRL PRFFSSSSAP TNGSSGPSLN LIKPKLTPSP PPHQSRGLLR SIYTVSPSSS FSKKSVFVLS AAALSTAIAY SAVIPSDHDQ
0101: SNRSPSGNSR IYESIEDAVQ KSGNSLRRVV HHARQTGVAV SVLWQSLRSV LSSANHEVRA GFELRVAALL ADIASANAAR RAALVGAGSG AVVDWLLETV
0201: AIPGDRIGAQ DEAARALAYL IADPTVRKDA LGRPDAVPKL LKFVFSCQPK NKKHSRRSSF DISDSLKGRS MLVAAIMDIV TSNCDTIEKT PFKSSLPGNA
0301: TMRDIAAAIQ VIEEGGMYFD EPEKDDDSDD GRSGIKGIGI KILEGTTVLG LSRTSGLAPL GDLNANAGEE TPKTFALLSK HDNSSQANLS SAVIPGLWDD
0401: LHCQHVAVPF AAWALANWAM ASDTNRSHIQ ELDRDGQVVM TALMAPERTV KWHGSLVARL LLEDLKLPLS DSVSDWSSSL LATVSHASKT EDISLAQVAL
0501: SAFLVSVDRS DKAQKMVMEK GLHLMRDSAR KTRKHKAVQE GLSKALELLC AGDMHLSLEE SQKWSGILLS WVLGKVASDT VQSSARRILS RTFEDYGPHS
0601: VPISQGWLTL IMNEILNHSK TVSAKGASLP KNEKPKVDQS KVTSATQSTN LLAVAVVNLA MAQLGTVPES VNNVPLADLL LSEPFAVPIK NLKKDSPPKF
0701: NAAESALATI KAIKSLTDVC AEDSVCQNKI VDFGILCLLR RFLLSDDYEK LGAIEAYDAS RALEARDRTP DSLGESSITD IQDPCSVRVP ASAHIRRHAA
0801: RLLTILSLLP QVQKIILADE TWCKWLDDCA KGNISCCNDP KTQSYARASL LNVYCNQQDG SGSGDGGSSK PDISNMNSNC PRYGDMIFLI NPGLPHWKCH
0901: EKERQSGKKN ESSSEGEPAN VTDTVGDHVV DASNLSSSID PSSSGSHVHD PEFDVIFLHG LRGGPFKTWR IAEDKSSTKS GLVEKIDQEA GKLGTFWPSE
1001: WLSNDFPQAR LFTLKYKTNL TEWSGASLPL QEVSSMILEK LVSAGIGDRP VVFVTHSMGG LVVKQILHKA KEEKLDKLVN NTAGVVFYSC PHFGSKLADM
1101: PWRMGLVLRP APSIGELRSG SPRLVELNDL LRQLHKKGVV EVLSFCETKV TPIVEGYGGW AFRMEIVPIE SAYPGFGELV VLESTDHINS CKPLSRSDPS
1201: YTEALQFLRK LSAQRLKPHV KREPGIHD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)