AT4G34020.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:16298553..16300897 | ||||||||
| Molecular Weight (calculated) | 47339.30 Da | ||||||||
| IEP (calculated) | 9.70 | ||||||||
| GRAVY (calculated) | -0.08 | ||||||||
| Length | 437 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKKLEVE GSSGTRLLAD 101: VLISKCADQV YDLVALPGGM PGAVRLRDCE ILEKIMKRQA EDKRLYGAIS MAPAITLLPW GLLTRKRTTG HPAFFGKLPT FWAVKTNIQI SGELTTSRGP 201: GTSFQFALSL AEQLFGETTA KSIEEFLLLR DGYQNPKNKE FNSIDWSLDH TPRVLIPVAN GSEAVELVSI ADVLRRAKVD VTVSSVERSL RITAFQGTKI 301: ITDKLIGEAA ESSYDLIILP GGHTGSERLQ KSKILKKLLR EQHESGRIYG ATNSSSTVLH KHGLLKEKRT TVYPSESDEP MNQQMIEGAE VVIDGNVITS 401: LGLATVTKFS LAIVSKLFGH ARARSVSEGL VHEYPRQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)