AT4G33620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cysteine proteinases superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G09730.2); Has 1439 Blast hits to 1292 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 715; Fungi - 291; Plants - 261; Viruses - 4; Other Eukaryotes - 168 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16147692..16152853 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 88891.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.69 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||
| Length | 783 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTLRSVQSRS KRKPIDVFDY SDEDDRVEEE SKKLLRKFDS PVTKKHHCAI DKYEFLRCFA KDTQSESKVL QHIVIDVEVP VKEEPSRCEL SGDGNSDLID 101: VISNGSHRRI GIDSLTSSSL SENDEVSTGE ATNPASDPHE VDPENAQVLI IPDVIIYGDI YCTNSKLTFS RNCMNVESSS VNATKGTFSC QWTIEDIIKI 201: ESQWCLEVET AFVNVLLKSR KPEGVDIAKD ISGIDLLKFS VYDPKWSKEV ETIRSLDSRY KNIWFDTITE SEEIAFSGHD LGTSLTNLAD SFEDLVYPQG 301: EPDAVVVRKQ DIELLKPRRF INDTIIDFYI KYLKNRISPK ERGRFHFFNC FFFRKLANLD KGTPSTCGGR EAYQRVQKWT KNVDLFEKDY IFIPINCSFH 401: WSLVIICHPG ELVPSHVNFH SFDDEVENPQ RVPCILHLDS IKGSHKGGLI NIFPSYLREE WKARHENTTN DSSRAPNMQS ISLELPQQEN SFDCGLFLLH 501: YLDLFVAQAP AKFNPSLISR SANFLTRNWF PAKEASLKRR NILELLYNLH KGHDPSILPA NSKSEPPHCG VSNRNDQETE SENVIECCNW IKPFDGSSST 601: VTDISQTKTC SPDLILSKEV SYSGGYDPPS SKLRKVFMSP IVEEVQESCE KKDHLEMDIQ KSTGHEIETL RKEGCMLYIE DSDDEEAVSV EYVSDSQDSY 701: EVEMKVEDDD DDELIVTGES SGIHGSREIK SDSASIERVN KSRDSTAASC YNDFLLVLSD DERSSDDKEN ILISSNVMAK PKT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)