AT4G33390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF827) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT2G26570.1); Has 166665 Blast hits to 84155 proteins in 3581 species: Archae - 2138; Bacteria - 38967; Metazoa - 69244; Fungi - 13477; Plants - 9635; Viruses - 620; Other Eukaryotes - 32584 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16075282..16077706 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87113.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.75 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||
| Length | 779 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDLKTTDAL SLPVVSDNGG IIEPELQLPQ AIPTELENNE EENGTIQQSQ SEEDSAENGK IYMDDTFLPS KSQVKETQDS PTTPSFVSPS AEIVLPRVNT 101: KYEAEGTTRN AVSPRPLYSP RSIGSPRALL SPRFAGSSSP LSNGTPISMD SFRDSIDTAS PFESVKEAVS KFGGITDWKA HRMKVLERRN FVEQELDKIQ 201: EEIPEYKKKS EMVEMSKMLA VEELESTKRL IEELKLNLEK AETEEQQAKQ DSELAKLRVQ EMEQGIADEA SVASKAQLEV AQARHTSAIS ELESVKEELQ 301: TLQNEYDALV KEKDLAVKEA EEAVIASKEV ERKVEELTIE LIATKESLEC AHSSHLEAEE HRIGAAMLRD QETHRWEKEL KQAEEELQRL KQHLVSTKEL 401: QVKLEFASAL LLDLKKELAD HKESSKVKEE TSETVVTNIE ISLQEKTTDI QKAVASAKKE LEEVNANVEK ATSEVNCLKV ASSSLRLEID KEKSALDSLK 501: QREGMASVTV ASLEAEIDIT RCEIALVKSK EKETREEMVE LPKQLQQASQ EADEAKSFAE LAREELRKSQ EEAEQAKAGA STMESRLFAA QKEIEAIKAS 601: ERLALAAIKA LQESESSSKE NAVDSPRTVT LTIEEYYELS KRAHEAEEAA NARVAAAVSE VGEAKETEKR SLEKLEEVNK EMVERKATLA GAMEKAEKAK 701: EGKLGVEQEL RKWREVSEKK RKNGSSHGKS IQGSKEKEAE TSVSNETETN PIPQVNPVKK KKKLFPRFFM FLMKKKSHK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)