AT4G33020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.514 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ZIP metal ion transporter family | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Fe(II) transporter isolog family | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ZIP9; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1); Has 1755 Blast hits to 1721 proteins in 263 species: Archae - 0; Bacteria - 88; Metazoa - 470; Fungi - 500; Plants - 517; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15932603..15934267 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36153.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.57 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 344 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASILISGAA GVSIPLVGTL LPLNGGLMRG AKAFAAGVIL ATGFVHMLSG GSKALSDPCL PEFPWKMFPF PEFFAMVAAL LTLLADFMIT GYYERKQEKM 101: MNQSVESLGT QVSVMSDPGL ESGFLRDQED GGALHIVGMR AHAEHHRHSL SMGAEGFEAL SKRSGVSGHG HGHSHGHGDV GLDSGVRHVV VSQILEMGIV 201: SHSIIIGISL GVSHSPCTIR PLLLALSFHQ FFEGFALGGC VAEARLTPRG SAMMAFFFAI TTPIGVAVGT AIASSYNSYS VAALVAEGVL DSLSAGILVY 301: MALVDLIAAD FLSKKMSVDF RVQVVSYCFL FLGAGMMSAL AIWA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)