AT4G32510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.795 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HCO3- transporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, C-terminal (InterPro:IPR011531), Bicarbonate transporter, eukaryotic (InterPro:IPR003020); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT5G25430.1); Has 2374 Blast hits to 1394 proteins in 189 species: Archae - 0; Bacteria - 4; Metazoa - 1794; Fungi - 254; Plants - 226; Viruses - 1; Other Eukaryotes - 95 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15685903..15688811 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76286.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.34 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.19 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 673 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGVKFPFGG IINDFNGRRK CYKQDWLAAF NSGVRILAPT LYIFIASALP VIAFGEQLSR ETDRSLGIAE SLASTALCGI IHSVFGGQPL LIVGVAEPTI 101: IMYTYLHSFS KSRPELGQKL YLAWAGWVCV WTAVLLMLLA MLNACNIISR FTRIAGELFG MLITVLFIQE AVKGLIGEFL VPKSDDPSLE VYQFQWRYTN 201: GLLAVIFSFG LLYTALKSRR ARSWKYGFRW MRGFIGDYGT LLMLVLWSAF SYTVPRNLPE GVPRRLELPL PWASESLYHW TVVKDMAKVP PLYILAAFIP 301: AIMIAGLYFF DHCVSAQMAQ QKEFNLKNPT AYHYDIFILG IMTLICGLLG LPPSNGVIPQ SPMHTKSLAV LKKQQMRKKM VQKAKECMRE KASNSEIYGR 401: MQDVFIEMET SPKATSVVKE LENLKEAVMK ADDGGGETKG KKFDPEVHIE DHLPVRVNEQ RVSNLLQSVL VGLLILAVPV LRMIPTSVLW GYFTYMAVDS 501: LPGNQFWERL QLLFITPGRR FKVLEGLHAS FVEIVPYKSI VMFTLFQLLY FLICYGVTWI PVGGILFPLP FFILIALRQY ILQRLFDPSH LQVLDSSEYE 601: EMVGAPQRNS SFGFNGELRE AHNIPLSVVE NSEDEFYDAE ILDEITTSRG ELKHRTLSVK EDRSQMVKIY NHS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)