AT4G32500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : K+ transporter 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
K+ transporter 5 (KT5); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, N-terminal protein myristoylation, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Shaker pollen inward K+ channel (TAIR:AT2G25600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15681122..15685214 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98510.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.69 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 880 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGIEKRKKMV WFWPEKHEGG VIKEAEDVAA EHISREGTMS HYSFSKGLLP PLGVGATARS SRHIKLRCFI VSPFDPRYRA WDWFLVILVL YTAWASPFEF 101: GFLQTPRAPL SILDNVVNGF FAVDIVLTFF VAFLDKATYL LVDDPKRIAW RYTSTWLIFD VVSTVPYELF GSLLHNTIQG YGIFSMLRLW RLHRVSKCFA 201: RLEKDRKYNY FWIRCTKLLL VSLFVVHCGA CFCYSIAAHY PDPSMTFMAL AEANWKQKSL LIRYVTAMYW SITTFSTTGY GDIHGNNAEE RAFILFYMIF 301: NLGLLAYIIG NMTNLVVHVT SRTRNFRDTI QAASAFAQRN NLPLGLQEQM VAHLSLRYRT DSEGLQQQEI IDSLPKAIRS SISHYLFYEV VDKTYLFHGI 401: SNDLLFQLVS EMKAEYFPPK EDVILRNEAP SDFYIMVTGA VDIIARVNGV DQVVGEAQTG HVFGEVGVLC YRPQLFTVRT KRLSQLLRLN RTAFLNLVQA 501: NVGDGAIIMN NLLQHLKDST DPVMKGILAE TELMLAQGKM DLPLSLCFAA ARGDDLLLHQ LLKRGSNPNE TDKNGRTALH IAASKGSQYC VVLLLEHGAD 601: PNIRDSEGSV PLWEAIIGRH EENAKLLSEN GATLSFDTVG YFSCLAVGQN NLNALKDIVK YGGDISLSDV NGTTALHRAV SEGNLEIVQF LLEKGADMDK 701: PDVYGWTARA LAEHQGHEDI KALFYNQRPV ERKTILVSGT PEIKPLMKHS SEPVMTHHHS REAMPPLARA VSQRRKLSNF KNSLFGIMSA AKTGDEGGAS 801: TRTGISEGVG GVYPARVTIS GEASSSGKVV KLPDSLEELI EIGEKKLGFV ATKILSREGA EIDDIRIIRD GDFLLLLKVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)