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AT4G31030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.862
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Putative membrane lipoprotein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative membrane lipoprotein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL022198EMBL:AL161578EMBL:CP002687EnsemblPlants:AT4G31030
EnsemblPlants:AT4G31030.1entrez:829230GeneID:829230GO:GO:0016021
Gramene:AT4G31030.1KEGG:ath:AT4G31030Pfscan:PS51257PIR:D85363
Proteomes:UP000006548RefSeq:NP_194832.1STRING:3702.AT4G31030.1TAIR:AT4G31030
TMHMM:TMhelixUniGene:At.42944UniGene:At.75609UniProt:O65547
Coordinates (TAIR10) chr4:-:15111217..15111599
Molecular Weight (calculated) 4983.15 Da
IEP (calculated) 8.22
GRAVY (calculated) 0.32
Length 44 amino acids
Sequence (TAIR10)
(BLAST)
1: MYTINKPTKE ALSDMGFGPW NLGFGCMFTC EIVVIFFTTS KRIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)