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AT4G29760.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29770.2); Has 63 Blast hits to 63 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:829098eggNOG:ENOG410JVDNeggNOG:ENOG411060CEMBL:AL079344
EMBL:AL161575EMBL:CP002687EnsemblPlants:AT4G29760EnsemblPlants:AT4G29760.1
entrez:829098GeneID:829098Gramene:AT4G29760.1HOGENOM:HOG000148670
KEGG:ath:AT4G29760OMA:EFTEYSAPhylomeDB:Q9SU75PIR:T09939
Proteomes:UP000006548RefSeq:NP_194705.1STRING:3702.AT4G29760.1TAIR:AT4G29760
UniGene:At.54551UniProt:Q9SU75
Coordinates (TAIR10) chr4:+:14574114..14575148
Molecular Weight (calculated) 31150.40 Da
IEP (calculated) 6.71
GRAVY (calculated) -0.21
Length 280 amino acids
Sequence (TAIR10)
(BLAST)
001: MAERLLQSMS RVAGRCHPDC VKASDEQEDY HASQNAALVA VNLISSARLI LKLDAEFTEY SAQFLMDNAG KEDDPGEVDQ QRNQVTTENC LRYLAENVWT
101: KKENGQGGMD QQRPVLTVKD CLELAFKKGL PRREHWAHLG CTFKAPPFAC QIPRVPVKGE VVEVKTFDEA FKLLVHQPIG AKLHLFSPQI DNVGEGVYKG
201: LTTGNETHYV GLRDVLIASV EEFEGDSVAI VKICYKKKLS FIKVSLSVRF LSVAHDGDKS KFIAPTGLLV DFCVPRLSIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)