AT4G29654.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 3461 Blast hits to 3431 proteins in 81 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 0; Plants - 3253; Viruses - 10; Other Eukaryotes - 12 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:14531601..14532454 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 18248.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.99 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||
| Length | 158 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHFKIVGLRI FWFDPIYSRG QRINHDKVYP RHICLNFVSA LIGRVTTKAD VYSFGVILME LVTSKEALDK KRSDAEHHIL KNRNIIDDVA RLAIHCCAKE 101: LTQRPEMKYV VSTLTSLCDT WKPSEIVDND REDTSVLELV KRWKEQEMEG SSSGIIVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)