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AT4G26830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : O-Glycosyl hydrolases family 17 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G55180.1); Has 2849 Blast hits to 2768 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 2823; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEYVeggNOG:ENOG410Y94BEMBL:CP002687EnsemblPlants:AT4G26830
EnsemblPlants:AT4G26830.1entrez:828790Gene3D:3.20.20.80GeneID:828790
GO:GO:0004553GO:GO:0005975Gramene:AT4G26830.1hmmpanther:PTHR32227
hmmpanther:PTHR32227:SF102InParanoid:F4JVS0InterPro:IPR000490InterPro:IPR012946
InterPro:IPR013781InterPro:IPR017853KEGG:ath:AT4G26830OMA:WIKTHIM
PaxDb:F4JVS0Pfam:PF00332Pfam:PF07983PRIDE:F4JVS0
PROSITE:PS00587ProteinModelPortal:F4JVS0Proteomes:UP000006548RefSeq:NP_194413.2
scanprosite:PS00587SMART:SM00768SMR:F4JVS0SUPFAM:SSF51445
TAIR:AT4G26830UniGene:At.54522UniProt:F4JVS0
Coordinates (TAIR10) chr4:-:13494726..13496487
Molecular Weight (calculated) 49348.80 Da
IEP (calculated) 8.10
GRAVY (calculated) -0.11
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSFLPYFL ILSFLSAIDA HSGMVGVNYG RIANNLPSPE KVVNLLKSQG INRIKIFDTD KNVLTALANS KIKVIVALPN ELLSSAASHQ SFADNWIKTH
101: IMPYFPATEI EAIAVGNEVF VDPTITPYLV NAMKNIHTSL VKYKLDKAIK ISSPIALSAL ANSYPPSSGS FKPELIEPVV KPMLALLQQT SSYLMVNAYP
201: FFAYAANADK ISLDYALFKE NAGNIDSGTG LKYNSLFDAQ IDAVYAALSA VGFKGVKVMV TETGWPSVGD ENEIGASESN AAAYNAGLVK RVLTGKGTPL
301: RPTEPLNVYL FALFNENQKP GPTSERNYGL FYPNEGKVYN VPFTKKSTTP VNGNRGKVPV THEGHTWCVS NGEVAKEKLQ EALDYACGEG GADCRPIQPG
401: ATCYHPESLE AHASYAFNSY YQKNSRRVGT CFFGGAAHVV TQPPRYGKCE FPTGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)