AT4G26410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Uncharacterised conserved protein UCP022280 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13346760..13348791 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29203.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.17 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||
| Length | 263 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSETEATGVT DDSAPAIETE TVSDAMEHTA IGVVESVEGA IEGAEKWVGD LQRTVKESKD TAMRSARSLR ENSTSQFRSI QDFIPHALTQ YKTYENAFFS 101: KVTDELIYAK EHPAAAIGIG VAASLVLMRG PRRFLFRNTL GRFQSEEAQF LKAEKHVQEL NMSVDLMKKE SRKLLERTAL AEKDMKRGLS ELMNSGNDIH 201: RLAKSVHKAE CEAADLMDGL RQIPGRDAIK LRAEVASMTS LLRQKRIALN KRIMGMSDLG VSV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)