AT4G26330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.734 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:13320408..13323461 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81337.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 746 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MISSMNFWRC RCSKDDAEQS MLYSYNNGFL GFSAKLNSTQ AASLAKLNQV ITVFKSKSLK LHTTRSWDFL GLAVDNARRT PPPQLAYGSD IVVGIFDTGL 101: FISLKLLLLS ILGIWPESES FRETPEAKPI PSSWNGKCVG GEDFDPSVHC NRKLIGARFY LRGFEETYGT IDFTRDPEYR SPRDYLGHGT HTASTAVGSV 201: VRNVSGFFGL GRGTARGGAP LARLAVFKTC WGKDLEGVCT EADILAAFDD AIHDGVHVIS ASFGYSPPLS PFFESSADIG AFHAAERGIS VVFSTGNDGP 301: DPGVVQNVAP WAVSVAASTV DRSFPTRIVI DGSFTLTGQS LISQEITGTL ALATTYFNGG VCKWENWMKK LANETIILCF STLGPVQFIE EAQAAAIRAN 401: ALALIFAASP TRQLAEEVDM IPTVRVDILH GTRIRNYLAR SPTVPMVKIG PSKTVIGETT APSVAYFSSR GPSSLSPDIL KPDITAPGIG ILAAWPPRTP 501: PTLLPGDHRS IEWNFQSGTS MSCPHVAGVM ALLQSAHPDW SPSAIRSAIM TTAYTRDTSY DLILSGGSMK STDPFDIGAG HINPLKAMDP GLVYNTRTDD 601: YVLFMCNIGY TDQEIKSMVL HPEPSTTCLP SHSYRTNADF NYPSITIPSL RLTRTIKRTV SNVGPNKNTV YFVDIIRPVG VEVLIWPRIL VFSKCQQEHS 701: YYVTFKPTEI FSGRYVFGEI MWTNGLHRVR SPVVVFLSNA GFLASS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)