AT4G24350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphorylase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphorylase superfamily protein; FUNCTIONS IN: catalytic activity, nutrient reservoir activity; INVOLVED IN: response to wounding; LOCATED IN: plant-type cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: Phosphorylase superfamily protein (TAIR:AT4G24340.1); Has 2694 Blast hits to 2660 proteins in 1094 species: Archae - 2; Bacteria - 2523; Metazoa - 1; Fungi - 2; Plants - 125; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12609637..12611328 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36698.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.30 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||
| Length | 336 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDHTLSLLPF LFIIIISSFH VLPVSPTPSH KLKSATTIRK LNRGGPYIGL VTVIATEENA FLRSVDFRPD PTHPFLDLSG RRFRIGKIHG KKVVYVRCGR 101: GMVNGAAATQ QMIDVFNVKG IVHFGIAGNM NNSMSIGDVS IPKQITNAGL WDWLNPDKVK GVEDIAYLDV GNYNVPKGDG DNELGSIGYN YEQLYSVTGH 201: INAPQNVFWI NTTQEWLHLA ADLEKMELSQ CVNASLCLPK KPKLVVGLKA ATAYIFVDNA AYRNFLYDTF GVSSSDMESS AVAMTCASNG YPIIVIRGLS 301: DLAGEGGDNT VHKFGSLAAT NTAKAVLEFI RKLPPY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)