AT4G24170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.927 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding microtubule motor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT2G21300.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12543206..12546805 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 114526.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.96 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1004 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGGEEKILVS VRVRPLNEKE KTRNDRCDWE CINDTTIICK FHNLPDKSSY TFDKVFGFEC PTKQVYDDGA KEVALCVLSG INSSIFAYGQ TSSGKTYTMS 0101: GITEFAMDDI FAYIDKHKQE RKFTLKFSAM EIYNEAVRDL LCEDSSTPLR LLDDPERGTV VEKLREETLR DRSHLEELLS ICETQRKIGE TSLNEISSRS 0201: HQILRLTIES SSQQFSPESS ATLAASVCFV DLAGSERASQ TLSAGSRLKE GCHINRSLLT LGTVIRKLSK GKNGHIPYRD SKLTRILQNS LGGNARTAII 0301: CTMSPARSHL EQSRNTLLFA TCAKEVTTNA QVNLVVSEKA LVKQLQRELA RMENELKNLG PASASSTSDF YALMLKQKEE LIAKMEEQIH ELKWQRDVAQ 0401: SRVENLLKST AEERSSSSSM DSRRRRISYD STDFDEPRML NNLGKSNLYS PDEDGFLLDD TTPQFPGHNL HDKWEEMAQS TTQEPEDACK EVRCIEVNSG 0501: EAERVQIQDS LDDIVEKKEY EQNYESQKDD ADSSIKNIDM ELSLYTKPEA EDGVSVKKLI EDVQETEQSV EKQKQSPKKE EMEQYLSRDM SEQVTKSLPE 0601: EEQCVQEYGA YDKLEAQDVL TINKLEESQQ TEQSVEKEDT KKNLSSKKED LKQNLSMDQS EQLYKSPPED EKCVEVYEGS DKDDNTYEAL KKKVKEMQKT 0701: IEYFMSIQSA EEKQSPSFNI IDDTLSPGEY FKMRRSRSCR ENLLFTKAAA AAASRGFIFE TTNTSFDSDI TVSMDAQSIK DSDTETSSSS FHEFMAGLRE 0801: RTMQHHSTHS DDTDTKTMKP ENTDDGGEKT EFERQQSQII ELWQVCNVPL VHRTYFFLLF KGDPSDFVYM EVELRRLSFL KDSTETSRKQ TAKAVTRERE 0901: WLAKQIPNKF GKKEKEEVYK KWGVELSSKR RSLQVTHKLW NNNTKDIEHC KESASLIATL VGFVDSTLTP KEMFGLSLTP TTFNIKPSSG WKFSNSFSRI 1001: SFTG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)