AT4G24140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 5648 Blast hits to 5647 proteins in 1115 species: Archae - 17; Bacteria - 3672; Metazoa - 316; Fungi - 186; Plants - 193; Viruses - 6; Other Eukaryotes - 1258 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12530032..12533664 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56214.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.09 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||
| Length | 498 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVMKIKGAA TVAGTWLNEA VSFVVFCILD IVDSFLCLLY KAADYLFEAE WKPCYCLSDK EPITTTRGKI LLSHNNGESK ILTLSPLQEL GGRSKIELED 101: ISETLYTRPS LISDISTISV NELNKRFVKV TRSESECSGH NEKTKNKRRR SLTKSSLTVN FTVVEMLRGK IRPQNLNHDI SRWSDCDCGF CTSWASTSDK 201: NHSLFVKTQI PNGVTAKEDV LFIHGFISSS AFWTETVFPS LSASSSTHRL FAVDLLGFGK SPKPADSLYT LREHVEMIEK SVLHKYNVKS FHIVAHSLGC 301: ILALSLAARH GGLIKSLTLL APPYYPVPKG EKKPRQYVMK KVAPRKVWPP IALGASMACW YEHISRTICL LICKHHRVWQ FIAGVLTRNN RTVNFLIEGF 401: MCHTHNAAWH TLHNIICGTG SKLDTYLDIV RDKLKCNVTI FHGGDDELIP VECSYNVKQR IPRARVKVIE HKDHITMVVG RQDEFARELQ EIWKTSSC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)