AT4G24080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : aldolase like | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
aldolase like (ALL1); FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: sporophyte; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT4G10750.1); Has 3952 Blast hits to 3952 proteins in 838 species: Archae - 22; Bacteria - 2525; Metazoa - 2; Fungi - 198; Plants - 35; Viruses - 0; Other Eukaryotes - 1170 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12511384..12512290 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24633.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.37 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||
| Length | 231 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATKKSLKSR LQDGEKLLGH FLLSFSPELA EIAARAGFDF IVVYLEHGAG GIPKKALDLG PDGIMFPMVE TGRSASEAVS FCLYRPDGVR GCAYSVVRDS 101: SFGFNEGYLG NYADKLFIMC QIESEEGMKN VKEIIAVDGM DCVMMGPRDL SASLGLLNDP GNPKVKSVMR VAETAVLASD PANGGAYLAG MATAQDKTGD 201: LKARGYHVVL GSTDVSLYKK AVVDEVNAFK A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)