AT4G23160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12129485..12134086 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 141393.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1262 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVSDADASTS SSSIDIMPSA NIQNDVPEPS VHTSHRRTRK PAYLQDYYCH SVASLTIHDI SQFLSYEKVS PLYHSFLVCI AKAKEPSTYN EAKEFLVWCG 0101: AMDDEIGAME TTHTWEICTL PPNKKPIGCK WVYKIKYNSD GTIERYKARL VAKGYTQQEG IDFIETFSPV CKLTSVKLIL AISAIYNFTL HQLDISNAFL 0201: NGDLDEEIYM KLPPGYAARQ GDSLPPNAVC YLKKSIYGLK QASRQWFLKF SVTLIGFGFV QSHSDHTYFL KITATLFLCV LVYVDDIIIC SNNDAAVDEL 0301: KSQLKSCFKL RDLGPLKYFL GLEIARSAAG INICQRKYAL DLLDETGLLG CKPSSVPMDP SVTFSAHSGG DFVDAKAYRR LIGRLMYLQI TRLDISFAVN 0401: KLSQFSEAPR LAHQQAVMKI LHYIKGTVGQ GLFYSSQAEM QLQVFSDASF QSCKDTRRST NGYCMFLGTS LISWKSKKQQ VVSKSSAEAE YRALSFATDE 0501: MMWLAQFFRE LQLPLSKPTL LFCDNTAAIH IATNAVFHER TKHIESDCHS VRERSVYQAT LSYSFQAYDE QDGFTEYLSP ILRGTIMYIV SMFGLAGLEA 0601: LICFIFLFLF SFLTSFKASA QNPFYLNHDC PNRTTYSSNS TYSTNLKTLL SSFASRNASY STGFQNIRAG QTPDRVTGLF LCRGDLSPEV CSNCVAFSVN 0701: ESLTRCPNQR EAVFYYEECI LRYSHKNFLS TVTYEGELIM RNPNNISSIQ NQRDQFIDLV QSNMNQAANE AANSSRKFST IKTELTSLQT LYGLVQCTPD 0801: LARQDCFSCL TSSINRMMPL FRIGARQFWP SCNSRYELYA FYNETAIGTP SPPPLFPGST PPLTSPSIPG KSGNSTVLVV AIVVLAVLLF IALVGYCFLA 0901: QRTKKTFDTA SASEVGDDMA TADSLQLDYR TIQTATNDFA ESNKIGRGGF GEVYKGTFSN GKEVAVKRLS KNSRQGEAEF KTEVVVVAKL QHRNLVRLLG 1001: FSLQGEERIL VYEYMPNKSL DCLLFDPTKQ TQLDWMQRYN IIGGIARGIL YLHQDSRLTI IHRDLKASNI LLDADINPKI ADFGMARIFG LDQTQDNTSR 1101: IVGTYGYMAP EYAMHGQFSM KSDVYSFGVL VLEIISGRKN SSFDESDGAQ DLLTHTWRLW TNRTALDLVD PLIANNCQNS EVVRCIHIGL LCVQEDPAKR 1201: PTISTVFMML TSNTVTLPVP RQPGFFIQSS PVKDPTDSDQ STTTKSTPAS IDDELITDLY PR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)