AT4G23130.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 5 | ||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | ||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 5 (CRK5); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, programmed cell death, response to salicylic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 4 (TAIR:AT3G45860.1); Has 121629 Blast hits to 120099 proteins in 4447 species: Archae - 100; Bacteria - 13629; Metazoa - 44864; Fungi - 10560; Plants - 34243; Viruses - 400; Other Eukaryotes - 17833 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12117688..12120134 | ||||||||||||||||
| Molecular Weight (calculated) | 73763.40 Da | ||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||
| Length | 663 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSAYTSLNFL FLLTFFIGSL RVSAQLQDPT YVGHVCTNRI SRNSIYFSNL QTLLTSLSSN NAYFSLGSHS LTKGQNSDMV FGLYLCKGDL SPESCRECVI 101: FAAKDTRSRC PGGKEFLIQY DECMLGYSDR NIFMDTVTTT TIITWNTQKV TADQSDRFND AVLSLMKKSA EEAANSTSKK FAVKKSDFSS SQSLYASVQC 201: IPDLTSEDCV MCLQQSIKEL YFNKVGGRFL VPSCNSRYEV YPFYKETIEG TVLPPPVSAP PLPLVSTPSF PPGKGKNSTV IIIAIVVPVA ISVLICVAVF 301: SFHASKRAKK TYDTPGANDE EDDITTAGSL QFDFKVIEAA TDKFSMCNKL GQGGFGQVYK GTLPNGVQVA VKRLSKTSGQ GEKEFKNEVV VVAKLQHRNL 401: VKLLGFCLER EEKILVYEFV SNKSLDYFLF DSRMQSQLDW TTRYKIIGGI ARGILYLHQD SRLTIIHRDL KAGNILLDAD MNPKVADFGM ARIFEIDQTE 501: AHTRRVVGTY GYMSPEYAMY GQFSMKSDVY SFGVLVLEII SGRKNSSLYQ MDASFGNLVT YTWRLWSDGS PLDLVDSSFR DSYQRNEIIR CIHIALLCVQ 601: EDTENRPTMS AIVQMLTTSS IALAVPQPPG FFFRSNHEQA GPSMDKSSLC SIDAASITIL APR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)