AT4G23010.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.690 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-galactose transporter 2 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-galactose transporter 2 (UTR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT1G12600.1); Has 1131 Blast hits to 1131 proteins in 225 species: Archae - 0; Bacteria - 2; Metazoa - 559; Fungi - 171; Plants - 221; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12060318..12062486 | ||||||||||||||||||||
| Molecular Weight (calculated) | 40344.50 Da | ||||||||||||||||||||
| IEP (calculated) | 9.36 | ||||||||||||||||||||
| GRAVY (calculated) | 0.53 | ||||||||||||||||||||
| Length | 362 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK 101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQA 201: RKLKKTRLTL VMCVVQMEML FCSTVVGLPF LFVPMVLTGE VFRAWTACAQ HPYVYGVLVF EAMATFIGQV SVLSLIALFG AATTALITTA RKGVTLLLSY 301: LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)