AT4G23000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.533 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species: Archae - 0; Bacteria - 98; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12055241..12060028 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 117049.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||
| Length | 1015 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGSDKNSARF LHNLKMERVR TILTHTYPYP HEHSRHAMIA VVLGCMFFIS SENMHSLVEK LDNNFKWWSM YACLLGFFYF FSSPFIKKTI RPSYSTFSRW 0101: YIAWILVAAL YHLPSFQSMG LDLRMNLSLF LTIYISSIVF LLVFHIIFLG LWYIGLVSRV AGRRPEILTI LQSCAVLSIS CCIFYSHCGN RAFQRQTPLE 0201: KRHSSRFSLW KGEDGNSTWL AKFTHIDELR DQVCSSWFAP VGSARDYPLL SKWVIYGELA CNGSCPDSSD EISPIYSLWA TFIGLYIANY VVERSTGWAL 0301: AHPLSVENYE KLKRQQMKPN FLDMVPWYSG TSADLFKTVF DLLVSVTVFL GRFDMRMMQA AMNKDCDGNK SKELLYDHFA DKTDFWFDFM ADTGDGGNSS 0401: YSVAKLLAQP FINVPLDNDS ISLERGNILL IGGDLAYPNP SAFTYEKRLF CPFEYALQPP HWYKTDSISV NKPELPDGVS DLKHYDGPQC FLIPGNHDWF 0501: DGLNTFMRYV CHKSWLGGWF MPQKKSYFAL QLPKGWWVFG LDLALHGDID VYQFNFFSKL VKEKVGENDA VIIITHEPNW LLDWYWKDDT GKNMRHLIFE 0601: FLKGRCKLRM AGDLHHYMRH SCTQSDGPVH VPHLLVNGCG GAFLHPTHVF RCFSKFYGAS YESKSAYPSF EDSSRIALGN ILKFRKKNWQ FDFIGGIIYF 0701: LLVFSLFPQC ELGHILRGDS FSGHLGSFFG TVWSSFVYVT EQSYVSFTGV LMLLITAIMF VPSKISRRKR LLIGILHVSA HLMAALILML LLELGIEICI 0801: QHKLLANSGY HTLYQWYKSV ENEHFPDPTG LRDRIEQWTF GLYPACIKYL MSAFDIPEVM AVTRTNICRE GMESLSRSGA AIYYASVFLY FWVFSTPVVS 0901: LVFGSYLYIS INWLHIHFDE AFSSLRIANY KSFTRFHIKP DGDLEVFTLG VDKVPKEWKL DKDWDAEPRS TVKMSHHRRF PSKWCATTLQ QDPVNTVKIV 1001: DKFVIHRSEK ETGGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)