AT4G22710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 706, subfamily A, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP706A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 706, subfamily A, polypeptide 2 (CYP706A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 1 (TAIR:AT4G22690.1); Has 33282 Blast hits to 33032 proteins in 1653 species: Archae - 51; Bacteria - 3398; Metazoa - 11897; Fungi - 7097; Plants - 9690; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11935038..11936618 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59429.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 526 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTASSKSNI NLSQVLNTEE PYSSVMLAVA ALLAVVCYLW IQGKSKSKKE PPLPPGPWPL PIVGNLPFLN SDVLHTQFQA LTLKYGPLMK IHLGSKLAIV 101: VSSPDMAREV LKTHDITFAN HDLPEVGKIN TYGGEDILWS PYGTHWRRLR KLCVMKMFTT PSLEASYSTR REETRQTIVH MSEMAREGSP VNLGEQIFLS 201: IFNVVTRMMW GATVEGDERT SLGNELKTLI SDISDIEGIQ NYSDFFPLFS RFDFQGLVKQ MKGHVKKLDL LFDRVMESHV KMVGKKSEEE EDFLQYLLRV 301: KDDDEKAPLS MTHVKSLLMD MVLGGVDTSV NASEFAMAEI VSRPEVLNKI RLELDQVVGK DNIVEESHLP KLPYLQAVMK ETLRLHPTLP LLVPHRNSET 401: SVVAGYTVPK DSKIFINVWA IHRDPKNWDE PNEFKPERFL ENSLDFNGGD FKYLPFGSGR RICAAINMAE RLVLFNIASL LHSFDWKAPQ GQKFEVEEKF 501: GLVLKLKSPL VAIPVPRLSD PKLYTA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)