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AT4G22666.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G22630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVW4eggNOG:ENOG41105I5EMBL:CP002687EMBL:DQ487604
EnsemblPlants:AT4G22666EnsemblPlants:AT4G22666.1entrez:3770028ExpressionAtlas:Q1G3I0
GeneID:3770028GO:GO:0016021Gramene:AT4G22666.1InterPro:IPR016140
KEGG:ath:AT4G22666OMA:PEMTPECPfam:PF14368PhylomeDB:Q1G3I0
Proteomes:UP000006548RefSeq:NP_001031699.1SMART:SM00499SMR:Q1G3I0
SUPFAM:SSF47699TAIR:AT4G22666TMHMM:TMhelixUniGene:At.47958
UniGene:At.70871UniProt:Q1G3I0
Coordinates (TAIR10) chr4:+:11917161..11917733
Molecular Weight (calculated) 16587.70 Da
IEP (calculated) 4.47
GRAVY (calculated) 0.05
Length 160 amino acids
Sequence (TAIR10)
(BLAST)
001: MAYTNQISAV VFLAVAIAPL LAEPQSTMFP EMTPECATVM PDLLEKCFAT GSVTPTEDCC TDLKSATSTQ VTCLCDNYIA NPAVSNITGP YSKAITTKCG
101: VFDKYSCDGT SKGGEEKKGG SSSSNGKDNG KSEGNGGRAN SVAASMAMFG LLASLVFVMF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)