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AT4G21890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.739
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:828278eggNOG:ENOG410INSGeggNOG:ENOG4110141EMBL:AL021890
EMBL:AL161556EMBL:BT021119EMBL:BT025718EMBL:CP002687
EnsemblPlants:AT4G21890EnsemblPlants:AT4G21890.1entrez:828278GeneID:828278
GO:GO:0005634Gramene:AT4G21890.1hmmpanther:PTHR12298hmmpanther:PTHR12298:SF22
HOGENOM:HOG000210033KEGG:ath:AT4G21890OMA:DSWEMARPhylomeDB:O49712
PIR:T05471Proteomes:UP000006548RefSeq:NP_193920.1TAIR:AT4G21890
UniGene:At.49710UniProt:O49712
Coordinates (TAIR10) chr4:-:11611874..11612674
Molecular Weight (calculated) 29853.10 Da
IEP (calculated) 6.05
GRAVY (calculated) -0.20
Length 266 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLHLKNLFG RFQEQFGSGP GLGPGSGVCL MIVEGISSNI IQSIFRASAS LYSSEPWKRL RPGHLFGVRV GKDSDWSGKR QPFQCVQFIG GDGGDIAIYM
101: YRSMSYALKM TDGDSWEMAR DPNVEVFRVT YELESLMLPS NKRMVKSLSL EVSGTDRFPI MDVARCMTSG ELQFRSPTLE ELRLVFAVMK ALSLVHPLLL
201: QEEKQVRGLP RMIKFSPFIE TVDVQWPSEM GKGHDFVAVT VSHPPGQSYE QKREDDELEI VSGMTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)