AT4G21640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G21630.1); Has 6245 Blast hits to 5567 proteins in 953 species: Archae - 166; Bacteria - 3252; Metazoa - 73; Fungi - 189; Plants - 2108; Viruses - 0; Other Eukaryotes - 457 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:11496834..11500618 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78548.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.88 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 733 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENSFLSSKL VFLLAIALVL FLNTELSFLT AEGASDSNSK VYIVYLGQRE HDDPELLTAS HHQMLESLLQ SKEDAHNSMI YSYQHGFSGF AALLTSSQAK 101: KISEHPEVIH VIPNRILKLK TTRIWDHLGL SPIPTSFSSS SSAKAKGLLH NTSMGSEAII GVVDSGIWPE SKVFNDQGLG PIPKRWRGKC RSGEKFNATM 201: HCNKKLIGAK YYQSGLLAMN GGKFNRIIIR DFKSNRDATG HGTHTATIAG GSFVPNASFY GLARGTVRGG APRARIASYK ACWNVVGWGG ICSSADMWKA 301: YDDAIHDQVD VLSVSIGASI PEDSERVDFI AAFHAVAKGI TVVAAAGNDG SGAQTICNVA PWLLTVAATT LDRSFPTKIT LGNNQTFFGK TILEFDSTHP 401: SSIAGRGVVA VILAKKPDDR PAPDNSYIFT DYEIGTHILQ YIRTTRSPTV RISAATTLTG QPATPKVAAF SSRGPNSVSP AILKPDIAAP GVSILAAVSP 501: LDPGAFNGFK LHSGTSMSTP VVSGIIVLLK SLHPKWSPAA MRSALVTTAW RTSPSGEPIF AQGSNKKLAD PFDYGGGLVN PEKAAKPGLV YDMGIKDYIN 601: YMCSAGYNDS SISRVLGKKT KCPIPKPSML DINLPSITIP NLEKEVTLTR TVTNVGPIKS VYRAVIESPL GITLTVNPTI LVFKSAAKRV LTFSVKAKTS 701: HKVNSGYFFG SLTWTDGVHD VTIPVSVKTT ISM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)