AT4G20240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily A, polypeptide 27 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily A, polypeptide 27 (CYP71A27); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 20 (TAIR:AT4G13310.1); Has 27160 Blast hits to 26983 proteins in 1467 species: Archae - 44; Bacteria - 2315; Metazoa - 10770; Fungi - 4604; Plants - 8614; Viruses - 3; Other Eukaryotes - 810 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10931745..10934212 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51967.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMILISLCL TTLLAFLFLK PLLKRITTTK PKLPPSPWRL PVIGNLHQLG PNPHRYLHSL SLRYGPLMLL HFGRVPVLVV SCPDVTNDIM KTHDLKFANR 101: PKSKAINIFM EGGRDIIFGP YGEDWKSMKS LGVVHLLNNK MVRSFENLRE EEIKVMTEKL EEASSSSSSV NLSKLLMTLT NDIICRITLG RKYNEEEGGI 201: DIKNLVMTSS EFFGKFFFGD FIPSLAWIDW ISGIDDKMKD INNKLDCFLD SMVQEHVDAD HKEPSDFIDM LLLIQKDKTK RFKFDRSDLI LILKDMFFSG 301: TATTASQLEW TMTELMRHPE CMKKLQDEIN SFSTHNLNVT EKEVEKMNYL HCVIKEGLRL HPSGPLLFRL PSEDVQLKGY DISAGTHVII NAWALQRNPA 401: IWGLDANEYR PERHFGTNLD FNVLIPNSFH LEQGEDFALE SDFLWFCPNW H |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)