AT4G19550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : zinc ion binding;transcription regulators | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
zinc ion binding;transcription regulators; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812); Has 916 Blast hits to 839 proteins in 148 species: Archae - 0; Bacteria - 97; Metazoa - 239; Fungi - 67; Plants - 82; Viruses - 13; Other Eukaryotes - 418 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10659414..10661170 | ||||||||||||||||||||
| Molecular Weight (calculated) | 24459.90 Da | ||||||||||||||||||||
| IEP (calculated) | 4.34 | ||||||||||||||||||||
| GRAVY (calculated) | -1.29 | ||||||||||||||||||||
| Length | 212 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEKSVKLLA RNLKVYGNKG VFPSRQSKGD LAEDLSDISD AEVAENLSNN KEFILKKRAW ELMNPEYQKG KYRKVTTRKK KDPANKIAPS KKTSATKTES 101: NAETENKKRP SLEINYNVLD KLFDPENSPK RAKLDKPVVV GDQIEYSKQN SEESLLKSQY SEEEEEEAEE PDWNEDYSNE DAYRGNEECY GNENLEFEDL 201: DDDEEDDEGV IW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)