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AT4G19480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.526
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL021768EMBL:AL161550EMBL:CP002687EnsemblPlants:AT4G19480
EnsemblPlants:AT4G19480.1entrez:827689GeneID:827689Gramene:AT4G19480.1
KEGG:ath:AT4G19480PIR:T05208Proteomes:UP000006548RefSeq:NP_193683.1
STRING:3702.AT4G19480.1TAIR:AT4G19480UniGene:At.54409UniProt:O49466
Coordinates (TAIR10) chr4:-:10614780..10615316
Molecular Weight (calculated) 13500.40 Da
IEP (calculated) 3.19
GRAVY (calculated) -0.02
Length 128 amino acids
Sequence (TAIR10)
(BLAST)
001: MTPLLTVSCV TSDTVDASTS SLDKGPSEEE SPTDFKCGVS EAMEVSLVDL STSSLDESPI GEENLNGFEC GVSDATEEVF LYILGFLADA STISLDEAPS
101: EEDNPSGFKC CVSEAMEDMF LCVDTNIG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)