AT4G18540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.732 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 209 Blast hits to 205 proteins in 54 species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10221203..10223028 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57525.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.40 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||
| Length | 520 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENASTVRFS SCRGVAFEIK PNANPFAVVT TDQNRNVNAE REGTSSRFRL PWDFMRNASK VVPSSIEHSM SRASSHFCDL DPDNDDEEEE KDDIFYLEEG 101: GIKEGNEEHN ETEEKAMLAS SASKHSEKPQ QPPIPKKRPS RLSIILLDQG LFTVYKHLFV LSLSLNVLAL VLAATGNFAY ARNRAALFSI ANILALILCR 201: SEAFLRLVFY LTVKLLGHSF VPLRIKIAVT ALLQSLGGIH SGCGVSSVAW LIYALVLTLK DRDNTSTAII AVASTILSLL CLTCLVWAFV ILTVSYDPKS 301: RSYTDDLGSK LIKTQEFWFT LVITIAILLP WLTVRRVPVD VSSLSGHASL IKFRGGLKSG ILGRISPSPL SEWHAFGIIS DGKTSHMMLA GAVGDFTKSL 401: VSKPPTHLWV RTVHFAGLPY LVNLYDKVLL VPRVRGFAYF YRFLCNRVRL RIKDYPHQDR IIVHDTAILG RPNVSKMSVE ASKKFGAQVV IVTSNPEGSR 501: DVVNACKASG VPAFGPIWDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)