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AT4G18395.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.674
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J856eggNOG:ENOG4111CKREMBL:CP002687EMBL:DQ446848
EnsemblPlants:AT4G18395EnsemblPlants:AT4G18395.1entrez:827569GeneID:827569
Gramene:AT4G18395.1KEGG:ath:AT4G18395OMA:KRAASMYPhylomeDB:Q1PE70
Proteomes:UP000006548RefSeq:NP_567554.1TAIR:AT4G18395UniGene:At.32909
UniGene:At.32911UniProt:Q1PE70
Coordinates (TAIR10) chr4:+:10169475..10169834
Molecular Weight (calculated) 13321.80 Da
IEP (calculated) 6.49
GRAVY (calculated) -0.08
Length 119 amino acids
Sequence (TAIR10)
(BLAST)
001: MLQKSPYIFI SDDNDQNNLQ YTSLKDVISS SDGFGSLFCH PQYSVPSQDG FLLSEMDSSN IAISNELVKR AASMYVQSSM IVIAPDTNWF QRFCLKAKHQ
101: AVAAIDCLRP VCRIFARSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)