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AT4G18220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.855
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Drug/metabolite transporter superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Drug/metabolite transporter superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 10 (TAIR:AT4G18210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G18220EnsemblPlants:AT4G18220.1entrez:827548hmmpanther:PTHR31376
hmmpanther:PTHR31376:SF17Pfam:PF16913SUPFAM:0043518TMHMM:TMhelix
Coordinates (TAIR10) chr4:+:10078768..10080109
Molecular Weight (calculated) 37821.40 Da
IEP (calculated) 8.63
GRAVY (calculated) 0.44
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MKGDQEVQVI GQSVATILGR LYYENGGNSK WLATVVQLVG FPILLPYHLL SVKTHTTTQR DGKLTSLRNR ALVYIVLGLL VGAACYLYSI GLLYLPVSTL
101: SLICASQLAF TAFFSYLLNS QKLTPIILNS LFLLTISSTL LAFNNEESDS KKVTKGEYVK GFVCTVGASA GFGLLLSLQQ LAFRKVLKKQ TFSEVINMII
201: YMSLVASCVS VVGLFASSEW KTLSSEMENY KLGKVSYVMN LVWTAVTWQV FSIGCTGLIF ELSSLFSNAI SALGLPVVPI LAVIIFHDKM NGLKVISMIL
301: AIWGFVSYVY QQYLDETNLK KSNEIPTTES PDRPEAEGSS EQSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)