AT4G18150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase-related protein of unknown function (DUF1296) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT1G29350.1); Has 231 Blast hits to 188 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 55; Fungi - 21; Plants - 25; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:10050211..10053790 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83594.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.61 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||||||
| Length | 758 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGGGGSVSN ANGGVPASSR KVIQDLKEIV ECSELEIYAM LVECDMNPDE AVNRLLSQDT FHEVKSKREK KKETKDHADS WTRNVPNRGA RSGNDSYNTS 101: RGGRNKYKSN ETGKIQGVPV NRRENGARNH LAGSSASSGL LGRLPGLLRR QPPSNSDLPS SKVKKAPTTP SDAVTLSSLP FPAYQSAWAS ANPGQRTMAE 201: IVKMGRPNLQ KNVALPRSSE AQESSSKAPL KDECPSIEKQ DVSYLSSSVL KPSAESKISS DQFSESQHLD ETLLDDIHRE TKTYPTGSPP DVDHNPLASV 301: SSRNLVDDES RDSLVCDDEN NKAERHSYEE NQDEDVSTSV ATGFQQLTIY NEEEQEALPK EEKHAVIIPN HLQVHTSECL HLMFGCFSSG IGSGQPSALN 401: DNLEEPLVAE DDSSFRHPDT NFYGEEEAEQ PRNAVTNEQV SYQIDSSYRF ENNQLFHPPS ETNPQRQNLD TYPNIMQQGY TSSLPNTLLP SGIQDGRESN 501: LHYSPFTTLY NTEISMAEAL RAASISPQNA IPSAGQQAAT LAQHLALNPY SHQPEMPLGH YGNLISYPFM AQCYNPFMLS AFQQVFPTGN HQSLVDMLMQ 601: YKTQTTAPPV PPPSAYGFGG GAVSSNNFPL NPTSAANSYE DVLSSQFNES NHLASSLQQQ NEKTTAWHQG QQANSRVVPG SGYYSYPGHQ NQQPPGFRQA 701: QQLQHQQQSS QQQQQQQHYG GHGYVSPYHS QAVMSLEHLH HQYQQQQNAR DASKQSQQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)