AT4G18080.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.838 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:10033210..10033935 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 28048.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.31 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||
| Length | 241 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERTEQDSGV TKRNCLGYNR RMYLIENLTE RLEDLMKRRR KAVRFGVELS FLVAEFMFLI PIEILAGETG EYSLCTKLLG VNEDDTGTSV VIGKLEEVFG 101: VVIWKKENKE HNVDLPESIF RYDDFIRLCA DATRALGKIV LALEKRQCER LKLSDLDSLF EDCQKVLMKI ELKLAEMKQQ VYRSVSTDYE SFSKSERFDS 201: LLRIKLMNRV IADNRFGRSV IGSYLLEIWQ SLFQAEALQE L |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)