AT4G17660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.955 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G47070.1); Has 120448 Blast hits to 119165 proteins in 4607 species: Archae - 125; Bacteria - 14071; Metazoa - 44732; Fungi - 10312; Plants - 33334; Viruses - 391; Other Eukaryotes - 17483 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9831401..9833006 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44221.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.76 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 388 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNCLFLFMSK KPKSRGNMEK EKKNIRGREF LQKSAPELTT RKTTLSFNLP TPRSLPSPTS IKDLYTDREQ NQNQNLRVFS FKELSDATCE FSRKLKIGEG 101: GFGSVYKATI NNPTVGDSHS SPLTVAVKKL NRQSLQGHKQ WLAEVHFLGV VNHPNVVRLL GYCSEDRERL LVYELMSNRS LEDHLFTLRT LTLSWKQRLE 201: IMLGAAQGLA YLHEIQVIYR DFKSSNVLLN EEFHPKLSDF GLAREGPEGD NTHVTTARVG TDGYAAPEYV ITGHLKTHCD VYSFGVVLYE IITGRRTLER 301: MKPLAEQKLL EWVKKYPINS KRFKMIVDSK LCNKYPIAMV RRVAKLADHC VNKIDKERPT MAFVVESLTN IIEESNSEDM GSSVGIRG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)