AT4G17640.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.940 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : casein kinase II beta chain 2 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes casein kinase II beta (regulatory) subunit. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
casein kinase II beta chain 2 (CKB2); FUNCTIONS IN: protein kinase regulator activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: protein kinase CK2 complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 1 (TAIR:AT5G47080.4). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9825438..9826988 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 31413.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.59 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||||||||||||||||||
| Length | 277 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF 101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHEEQ NELIESAAEM LYGMIHARFI LTSKGLASML DKYKNYDFGR CPRVYCCGQP 201: CLPVGQSDIP RASTVKIYCP KCEDVYYPRS KYQGNIDGAY FGTTFPHLFL MTYGHLKPQK ASQSYTQRVF GFKLHKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)