AT4G17483.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G17480.1); Has 614 Blast hits to 610 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 94; Plants - 140; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9747375..9748892 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33277.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.40 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||
| Length | 300 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKYSRRSIL LSTVVAAVLF SLIPVSISIP FILFHGIGDK CSGGVSNFTQ LLTNLSGSPG YCLEIGNGEK DSWFMPLRKQ TSVACEKVKA MKVLSQGYNI 101: VAESQGNLVA RGLIEFCDNA PPVINYISLG GPHAGIAKIP KCNSGPICAI GEALLKLEVY TDFVQDHIAP SGYIKIPGEI SKYLEHSKYL PKLNNERPDE 201: RNSTFKDRFT NLHNLVLVMF ESDTMLIPKE TAWFGYYEDE GFDTLLSAQQ TKLYREDWIG LKALDAAGKV KFESVLGDHL SISDEEVVEF VVPYLMQNCM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)