AT4G17250.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.970 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9671104..9673175 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 72843.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.77 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||
| Length | 647 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM 101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR 201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN 301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA 401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL 501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH 601: KPSHWPIKTQ AANSMYRISQ TLLMNSGSEG SVGERSGNAF GENREDT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)