AT4G16760.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : acyl-CoA oxidase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9424930..9428689 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72925.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.72 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 651 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVFEKSNR ARLSRKELFK STLRKCAHAF KRIIELRLNE EEAGRLRHFI DQPAYVDLHW GMFVPAIKGQ 101: GTEEQQKKWL SLANKMQIIG CYAQTELGHG SNVQGLETTA TFDPKTDEFV IHTPTQTASK WWPGGLGKVS THAVVYARLI TNGKDYGIHG FIVQLRSLED 201: HSPLPNITVG DIGTKMGNGA YNSMDNGFLM FDHVRIPRDQ MLMRLSKVTR EGEYVPSDVP KQLVYGTMVY VRQTIVADAS NALSRAVCIA TRYSAVRRQF 301: GAHNGGIETQ VIDYKTQQNR LFPLLASAYA FRFVGEWLKW LYTDVTERLA ASDFATLPEA HACTAGLKSL TTTATADGIE ECRKLCGGHG YLWCSGLPEL 401: FAVYVPACTY EGDNVVLQLQ VARFLMKTVA QLGSGKVPVG TTAYMGRAAH LLQCRSGVQK AEDWLNPDVV LEAFEARALR MAVTCAKNLS KFENQEQGFQ 501: ELLADLVEAA IAHCQLIVVS KFIAKLEQDI GGKGVKKQLN NLCYIYALYL LHKHLGDFLS TNCITPKQAS LANDQLRSLY TQVRPNAVAL VDAFNYTDHY 601: LNSVLGRYDG NVYPKLFEEA LKDPLNDSVV PDGYQEYLRP VLQQQLRTAR L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)