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AT4G16330.2
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1).
Protein Annotations
eggNOG:COG3491eggNOG:KOG0143EMBL:CP002687EnsemblPlants:AT4G16330
EnsemblPlants:AT4G16330.2entrez:827327ExpressionAtlas:F4JLS2Gene3D:2.60.120.330
GeneID:827327GO:GO:0016491GO:GO:0046872Gramene:AT4G16330.2
gramene_pathway:1.14.11.9gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYN
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF226InParanoid:F4JLS2InterPro:IPR005123
InterPro:IPR026992InterPro:IPR027443iPTMnet:F4JLS2KEGG:ath:AT4G16330
OMA:RACAEWGPaxDb:F4JLS2Pfam:PF03171Pfam:PF14226
Pfscan:PS51471PRIDE:F4JLS2PROSITE:PS51471ProteinModelPortal:F4JLS2
Proteomes:UP000006548RefSeq:NP_001190740.1SMR:F4JLS2STRING:3702.AT4G16330.2
SUPFAM:SSF51197TAIR:AT4G16330UniGene:At.4407UniProt:F4JLS2
Coordinates (TAIR10) chr4:-:9226298..9227914
Molecular Weight (calculated) 40378.60 Da
IEP (calculated) 6.14
GRAVY (calculated) -0.32
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)