AT4G15380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.589 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 4 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 4 (CYP705A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 15 (TAIR:AT3G20080.2); Has 33573 Blast hits to 33357 proteins in 1711 species: Archae - 54; Bacteria - 3945; Metazoa - 11617; Fungi - 7314; Plants - 9374; Viruses - 6; Other Eukaryotes - 1263 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8788762..8790391 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59249.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 517 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAMNMIDFQ NCFIFILLCL FSRLCYSHFF KKPKDPRLHF DLPPSPPSLP IIGHLHLLLS VLLHRSLQKL STKYGSILYL RVFRFPVVLI SSASIAYEIF 101: RAHDLNISYR GFTPTDDSLF AGSFSFISAP YGDYWKFMKK VLVTNVFGPQ AHEQSRGVRA DVLERFYGNL FDKAIKKQSV EICAEALKLS NSSICKMIMG 201: RSCSEERFRA LATELDVLTK KLFFANMLRA WFKKLVVSLF KKETTVISYR FDELLESILV EHEKKLDVHH QRTDLMDALL AAYRDENAEY KITRNHIKSI 301: IADLLFAGTE NQVQTIQWAM AEIINNPNVL ERLRGEIDSV VGKSRLIQET DLPKLPYLQA VVKETIRLHP PGPFFLRFTK EGCRIRGFYV PENTSVVVNV 401: YAVMRDPDAW EDPLVFKPER FLASSRAEQE EERREKEIKY LPFGSGRRSC PGENLAYVIM GTAIGVMVQG FEWRTTEEKI NMDEAVVGLS LTMAHPLKII 501: PVARTSNSLT SSLQKCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)