AT4G15320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase-like B6 | ||||||||||||
| Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||
| Computational Description (TAIR10) |
cellulose synthase-like B6 (CSLB06); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT4G15290.1); Has 2450 Blast hits to 2218 proteins in 444 species: Archae - 1; Bacteria - 809; Metazoa - 0; Fungi - 0; Plants - 1618; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:8742639..8747981 | ||||||||||||
| Molecular Weight (calculated) | 94476.80 Da | ||||||||||||
| IEP (calculated) | 8.37 | ||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||
| Length | 828 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSSSSLLP LCERISHKSY ILRIVDLTIL VLLFSLLWYR ILHMCENNTI WLVAFLCESC FSFMWLIITC IKWSPAEDKP YPNRLDERVH DLPSVDMFVP 101: TADPVREPPI IVVNTVLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFVKIWAPFC KKYNVRVRAP FRYFLNPLVA TDDSVFSKDW KMMKIYKVFY 201: YVYFCINMKR EYVKLCRKVE DATGDSHWLD ADDDFEAFSN TKPNDHSTIV KVLLKLFLKT TVRVFVQFSK VMYILKLIIV VWENKGGVGD EKEVPHLVYI 301: SREKRPNYLH HYKTGAMNFL VNDFYLTHLS FFDILIYLKI NVNDCRAVSF CYYDKNMMSL IYNFKQLRVS GLMTNAPYML NVDCDMYANE PDVVRQAMCV 401: FLQNSKNSNH CAFVQFPQNF YDSYTNELVV LQHYMKRGVA GIQGPIYIGS GCFHTRRVMY GLSSDDLEDD GSLSSVASRE FLSEDSLVRK YGSSKELVKS 501: VVDALQRKSN PQKSLANLVE AAQEVGHCHY EYQTSWGNLG WLYDSVAEDT NTSIGIHLRG WTSSFISPDP PAFLGSTPSV GPEAIVQHRR WATGSIEVLF 601: NKQSPLIGFR RKIKFRQRLA YFWVLMCIRS IPELVYCLLP AYCLLNNSAL FPKGPCLGII VTLVGMHCLY TLWQFMILGF SVKSCWLFSI QDIILKLLGI 701: SKIGFIVAKK NMPETRSGYE SKSKPSQGED DGLKLELAGF LVRLQRSSYS HGGGGGSALA ETCGCAMIVF GENDGSQEGL ELPKLNSKRG ISSIVEKTFV 801: ACILPFVRNH KVNEKKNHHI NIDRPNLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)