AT4G14280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.460 peroxisome 0.201 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18980.1); Has 563 Blast hits to 446 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 563; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8222518..8225074 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88855.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.52 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||
| Length | 798 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVDRPTDVVV EVGSSGRTIF RPDETPTPEP RRPTQLPPVP APEKKLTLFA LRLAVLEKIA SGLGSLGFVW ATVVLLGGFA GSLEITDFWF VTVILVIEGA 101: RLFSRSHELE LQHQSKYTIS GINIFRFLVK QINQIFHQVA HIAGDDNRPS VRETRTVQRN SGHITRTRTW KSSDVPMLPY TGWVFVSRNV SRIFYWLQIA 201: SAFASIFIST IQLIKQDYGG NDLKPKSTNL HAALTLFYSL ALAEALLFLV EKAYWEYMIS VIHILEKVNE ECGLERFGTG SVRRFFYDAY SRCLNGSIFD 301: GLKMDMVIFA MELLVANSLD EQLIGAEILS IFSTHDDYSV DTLQKIGTNL AIIERLVEML NWRDKNQEDV RMSAAEILSR LASKKQNSLR VAGIPGAIES 401: ISSLLESTRD SGEATDEIGE QSINHSNLWT LNNLGLLILK RLARDHENCG KIGKTKGLLS KIIDFTYAEK NLLENPNVAV AEPYKILAVK RSLKLLKKLV 501: STTGTTGKNL RMTISGIVFT VSNIRETLHH GKSQPHLQKL GAEILTFLAF EEGATEKIGG TGGVLKGLLC IFLNNEIPKD KSGVRVSAGE SVAMLAQGSK 601: SNCQKILRAN VLKGLVEALD NPLIRLNAAR ILRNLCAYTA PGQFNEQMKE VIKSAGATVL KAIKSEERKP QEVMVGLAPH ILKLMNTPEE LRGMFEEAGV 701: TEEELAKALI NILKRYEQPV PKVPRIRRFA IELTIAMMKA NVETVKTFQN LEMKNELETV FETAAELENF DIFSGTVGLA RHGSTINELI EEAMLLLR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)