AT4G14103.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.980 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : F-box/RNI-like superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G14096.1). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8126948..8128590 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50282.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||
| Length | 443 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLSGSRDVI SSLPDDISSH ILSFLPTKEA ASTSVLSKKW RYLFAFVPNL DLDDSVYLNP ENETEISTSF MDFVDRVLAL QGNSPLHKFS LKIGDGIDPV 101: RIIPWINNVL ERGVSDLDLH LNLESEFLLP SQVYLCKTLV WLKLRFGLYP TIDVEDVHLP KLKTLYIEAT HFEEHGVGLT KLLSGCPMLE DLVLDDISWF 201: IWDFASVSVP TLKRLRFSWQ ERDEFPKSVL LDTPNLVYLK FTDTVAGKYP KVNLDSLVEA HIDLRLLKPL LINYHQGYGE NDMVGNATDF IMRICNVKTL 301: YLSANTLQVL TYSCDAIPIF NNLTHLTIES NPRVGWQSVP GLLKNSPNLE TLIFQVIKIL KFGENSDDME KQREQIKYFL ETMPNLEKMI LYYNTPSVED 401: VTEVSSRLQR LVSKVASSTC IVQLISDNLS LSSTVSTNGL LCF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)