AT4G13590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Uncharacterized protein family (UPF0016) | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Uncharacterized protein family (UPF0016); LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G64150.1); Has 1766 Blast hits to 1641 proteins in 653 species: Archae - 19; Bacteria - 1010; Metazoa - 162; Fungi - 161; Plants - 209; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7901369..7903792 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37931.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.04 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.44 | ||||||||||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLTSLSKNA NSTATAVTVS SIQKLPFLSL SETLPCPKSS RKPTFLPLRC RRRPKLDLLW GKFRVRASDA GVGSGSYSGG EEDGSQSSSL DQSPATSSES 101: LKPRGPFPYS LSIALVLLSC GLVFSLITFV KGGPSSVLAA VAKSGFTAAF SLIFVSEIGD KTFFIAALLA MQYEKTLVLL GSMGALSLMT ILSVVIGKIF 201: QSVPAQFQTT LPIGEYAAIA LLMFFGLKSI KDAWDLPPVE AKNGEETGIE LGEYSEAEEL VKEKASKKLT NPLEILWKSF SLVFFAEWGD RSMLATVALG 301: AAQSPLGVAS GAIAGHLVAT VLAIMGGAFL ANYISEKLVG YVGGALFLVF AAATFFGVF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)