AT4G13190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.570 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G24790.1); Has 115847 Blast hits to 114617 proteins in 4231 species: Archae - 103; Bacteria - 13752; Metazoa - 42167; Fungi - 9708; Plants - 32895; Viruses - 382; Other Eukaryotes - 16840 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7659435..7661106 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43219.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.41 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 389 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSCFLGPSTN NKSRENEGSS MAAPYEQQNL PRNDRRQITT WEAVGTNKES PKNIKAKSFK FRELATATNS FRQEFLIGEG GFGRVYKGKM EKTGQVVAVK 101: QLDRNGLQGN REFLVEIFRL SLLHHPNLAN LIGYCLDGDQ RLLVHEFMPL GSLEDHLLDV VVGQQPLDWN SRIRIALGAA KGLEYLHEKA NPPVIYRDFK 201: SSNILLNVDF DAKLSDFGLA KLGSVGDTQN VSSRVVGTYG YCAPEYHKTG QLTVKSDVYS FGVVLLELIT GKRVIDTTRP CHEQNLVTWA QPIFREPNRF 301: PELADPLLQG EFPEKSLNQA VAIAAMCLQE EPIVRPLISD VVTALSFMST ETGSPSGLTG TALNPLSPKT VEDQGWLQCE SPRDVYSLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)