AT4G13160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.558 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF593 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G13630.2); Has 4019 Blast hits to 2992 proteins in 302 species: Archae - 16; Bacteria - 203; Metazoa - 1185; Fungi - 245; Plants - 407; Viruses - 98; Other Eukaryotes - 1865 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7653985..7654833 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33068.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.30 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||
| Length | 282 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDYQESYRLT FYGILVAFME LAFAYCLLCV SAFVFITSKL LLFMPCIGYQ NSDLCIQKLL FDWPFRIILR VQKLATTNRP SVLHHQEQEQ EQEQEQEEKT 101: MVDKDKNSEL MDRVRLLEVA VEQEKVAKAA LMVELEQERA ASASAADEAM AMILRLQADK ASLEMEGKQY ERMIDEKFAY DEEEMNILKE ILFKREREKH 201: FLEKELETYK HIDDDQETED NEKRECDEDG EPIVYDVHVI EDNSQTKVRD DDVAEHKEMK EEEIVKDHDS VSSPTSSSTH LP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)